dev/master/2016.12.11 - Updated baseline OM4 configuration: - use ePBL "n" settings - OM4_025 uses same hybrid coordinate bounds as OM4_05 - SIS2 fixes change OM4 answers - Primary diagnostics use the new general-coordinate diagnostics 7d01ed5 MOM6: Stop boundary extrapolation in wave_speed remapping f0693b3 Merge branch 'nicjhan-328-diagnostic-testing' into dev/master 6ded29f Merge branch '328-diagnostic-testing' of https://github.com/nicjhan/MOM6-examples into nicjhan-328-diagnostic-testing a9dc32e Corrected DIAG_COORD_DEF_Z in Baltic test 9039c8f Updated SIS2 and icebergs sub-modules 0d7b368 OM4: Added transport and MLE diagnostics 871d438 MOM6: Updated cell_methods for vhml and vhGM 6b54d72 *OM4 updated to use ePBLn settings a46e5e5 Merge branch 'dev/master' of github.com:NOAA-GFDL/MOM6-examples into dev/master 061932c Merge branch 'dev/master' of github.com:NOAA-GFDL/MOM6-examples into dev/master 12eb835 Merge pull request #115 from NOAA-GFDL/user/jpk/aja_dora_underscore_z fa59484 SIS2: *Reset t_surf to T_freeze ocean when part_size==0 1965c9e "webversion" option argument added back in 4cdf013 *OM4_025 updated coordinate bounds to match OM4_05 d67a48d Merge branch 'dev/master' into diagnostic-regridding 570c16f SIS2: Updated layout files for SIS2 f892f94 Merge branch 'dev/master' into diagnostic-regridding 6dcf7cf MOM6: Finalizing merge of nicjhan-334-rho-sigma-diagnostic-regridding 19aa406 Update MOM6 with @aja additions. #328 94d8205 Python3 fixes. #328 4972110 SIS2: Made VERONA_COUPLER a layout param 70aed9d SIS2: +Call data_override_unset_domain in get_sea_surface af6cb4d MOM6: Moved umo,vmo to MOM.F90 and based on uhtr,vhtr 1b79978 Merge branch 'dev/master' into diagnostic-regridding f4b9657 Merge branch 'dev/master' of github.com:NOAA-GFDL/MOM6-examples into dev/master 6d3bab8 SIS2: *Added halo updates for IST%t_surf 3dbb68c MOC plotting scripts uses vmo first before vh 0ae02de Updated Baltic_ALE_z_offline_tracers/SIS_input to recover answers 0c29727 FMS: +Updated FMS to origin/user/z1l/data_override 0cbd055 SIS2: *+Set the default for ADVECT_TSURF to True 255106b SIS2: *Set ADVECT_TSURF in SIS_input files 8744d3c +Added ADVECT_TSURF run time option 7006c85 Add get_z() to m6toolbox.py to handle new _z diagnostics 5e2d6ca Merge branch 'dev/master' into diagnostic-regridding 2fe5535 Synced submodules MOM6, SIS2 and icebergs 94aca6e MOM6: Handled multiple pull requests 4b5c906 MOM6: Merge branch 'ESMG-user/ksh/open_bc' into dev/master 83415bc MOM6: Moved to flat (no subdirs) mode for doxygen e4a54da SIS2: +Added slow_Domain_NH to ice_data_type b838b7f Merge branch 'dev/master' into diagnostic-regridding f260f57 Use new format to specify Z coordinate locations for diagnostic regridding. #328 f4edf7b Update test scripts to support Python3, update MOM. #328 9a7c873 MOM6: Added _xyave to all remapped diagnostics e10184a MOM6: Fix conflict with dimension names in diag_manager 66d6aeb MOM6: Changed default DIAG_COORD_Z grid to be WOA09 for deep configurations 2bf75a8 MOM6: Moved reading of regridding parameters into MOM_regridding.F90 f44755c MOM6: Hide interp_scheme when not needed, pt 2 379fb48 MOM6: Added arbitrary number of diagnostic coordinates, NUM_DIAG_COORDS 30e2680 Adding a few mask tables for 1/4 degree grid 16b4635 SIS2: +Merge branch 'MichaelWinton-user/mw/cmip6_diagnostics' into dev/master d488a94 MOM6: Using the new remapped diagnostics branch 7460103 SIS2: *Corrected the visible albedo transpose bug 94910d2 The dump diags tool should delete any diags that will be recreated. #328 c7cecd9 Merge and fix conflict. #328 64e809c Don't delete old diags when testing, these may be needed for manual inspection. #328 4ac2a56 Increase max number of diag files. #328 800027b Extend testing to handle dumping rho and sigma remapped diagnostics as well as z. #328 6110b55 Update MOM6 with new vertical remapping changes. #328 1032171 Add link to diagnostic testing from the README. #328 a035f79 Diag testing: ensure that experiment has run before processing available diags. #328 90a8357 Update MOM6 version. #328 62e9e88 Clean up diagnostic tests so they require fewer models runs to finish. #328 68a3657 Update MOM6 submodule with vertical remapping changes. #328 65ac3b1 Update tests for diags vertically remapped to z star coordinates. #328 665a43f Correct specification of z grid used for vertical remapping. #328 c1bf67d Update diagnostic testing to handle multiple platforms. #328 7361b91 Missing define from build script used for testing. #328 b5f1655 Keep build output on failed build during testing. #328 87ccc87 Test diagnostic data, rather than entire file. #328 8f0a259 Make experiment.py work with Python 3. #328 bc917d7 Default to GNU DEBUG builds for diagnostics testing. #328 0852ad2 Missing define from build script used for testing. #328 f96bd92 Keep build output on failed build during testing. #328 f654337 Be able to build models before testing begins. #328 4bb826c By default use mpirun for runs when doing diagnostics tests. #328 87fdccd Added missed file, SIS_parameter_doc.layout 67e4ee0 SIS2: +Modified SIS2 fast ice MOM_domains_init call b434543 Added missed SIS_parameter_doc.all